FISH Probes for Microbes
All Bacteria
EUB338（Green）
5′- GCT GCC TCC CGT AGG AGT -3′
anaerobic ammonium-oxidizing bacteria
Brocadia anammoxidans, Kuenenia stuttgartiensis
AMX820（Red）
5′- AAA ACC CCT CTA CTT AGT GCC C -3’
Halomonas sp.
HLM474（Red）
5′- CTG TGG GTG ATG TCC TTC CT -3′
Firmicutes (Gram-positive bacteria with low G+C )
AMX820（Red）
5′- CGG AAG ATT CCC TAC TGC -3′
Melissococcus pluton
Mplu464（Red）
5′- GTC ACG AGG AAA ACA GTT -3′
Salmonella spp., Plesiomonas shigelloides
Salm63（Red）
5′- TCG ACT GAC TTC AGC TCC -3′
Example of custom FISH probes for Microbes
| Probe | Target Microbes |
| ACAC | Actinobacillus |
| AGA832 | Actinobacillus |
| Alc-476 | Alcaligenes faecalis |
| AMX368 | all ANAMMOX bacteria |
| AMX820 | anaerobic ammonium-oxidizing bacteria |
| ARC915 | Archaea |
| BAC303 | most Bacteroidaceae and Prevotellaceae |
| BCE440 | Bacillus cereus |
| BIF164 | Bifidobacterium spp |
| BIF662 | Bifidobacterium spp |
| BKH72 | Burkholderia nodosa |
| BKH70 | Burkholderia unamae |
| BKH47 | Burkholderia gladioli |
| BSU193 | Bacillus subtilis |
| Bthe | Bacteroides thethaiotaomicron |
| CFB1082 | Bacteroidetes |
| CFB719 | Bacteriodetes |
| DSS658 | desulfo bacterium |
| DSV698 | Some Desulfovibrio, Bilophila wadsworthia, and Lawsonia intracellularis |
| ECO1167 | Escherichia coli |
| EN186 | Enterobacteriaceae |
| ENT | Enterobacteriaceae except Proteus spp. |
| EPS914 | Epsilonproteobacteria |
| EUB338 | All bacteria |
| EUK516 | Eukarya |
| FUS664 | Fusobacterium nucleatum |
| FUSO | Fusobacterium spp |
| Haeinf | Haemophilus influenzae |
| HLM474 | Halomonas sp. |
| KO12 | Many Pseudomonas species |
| LAC062 | Lactococcus lactis subsp. Lactis |
| LGC354B | Firmicutes (Gram-positive bacteria with low G+C content) |
| LGC354C | Firmicutes (Gram-positive bacteria with low G+C content) |
| MB311 | Methanobacteriales |
| MET980 | Methylobacterium |
| Methylobact2 | Methylobacterium |
| MG1200 | most Methanomicrobiales |
| MIT447 | Streptococcus mitis group |
| Mplu464 | Melissococcus pluton |
| MS821 | Methanosarcina |
| MSMX860 | Methanosarcina spp., Methanococcoides spp., Methanolobus spp., Methanohalophilus spp., Methanosaeta spp. |
| MUT590 | Streptococcus mutans |
| MZ1 | Thauera spp. |
| NEU | Nitrosomonas spp. |
| NIT3 | Nitrobacter spp. |
| OTU6-178 | Brachymonas denitrificans |
| PAE997 | Pseudomonas spp. |
| panfungal | All fungi |
| PAO651 | Accumulibacter cluster |
| PAR1244 | genus Paracoccus |
| Pdv1031 | Paracoccus denitrificans |
| Plar4 | Paenibacillus larvae |
| POG447 | Porphyromonas gingivalis |
| POGI | Porphyromonas gingivalis |
| PPU646 | Pseudomonas spp. |
| Psdhalo2 | Pseudomonas halodenitrificans |
| Pseaer A | Pseudomonas aeruginosa |
| Pseaer B | Pseudomonas aeruginosa |
| PSM G | Pseudomonas spp. |
| Sal3 | Salmonella enteritidis |
| Salm63 | Salmonella enteritidis |
| SAU069 | Staphylococcus aureus |
| SOB174 | Streptococcus sobrinas |
| SPB910 | Sphingobium |
| Sphingobium | Sphingobium |
| Spn | Streptococcus pneumoniae |
| SRB385 | Most Desulfovibrionales and other Bacteria |
| SSP | mutans group |
| STR405 | Streptococci |
| TDEN | Treponema denticola |
| Tfor439 | Tannerella forsythensis |
| Wol3 | Wolbachia pipientis |
| Wol4 | Wolbachia pipientis |
Price
| Code | Description | Tests | Price |
| BAC-30 | FISH probes for Microbes Custom made | 30tests (300μl) | From USD1,500- |
